# "Zoom in" button # highlight Q33-Q44-T23-A24 interaction in the half site # Gln33 is part of the first HTH helix, Q44 part of the # official recognition helix. This is taken from figure 6 # of the paper. # restrict halfall select halfall spacefill off reset rotate y 220 rotate x 40 rotate z 105 rotate x -20 zoom 140 translate y 26 #set shadows on set specular on select protein hbonds off select dna and halfall cartoons off backbone 50 wireframe 100 color cpk select major_groove and halfall color brown select minor_groove and halfall color blue set echo bottom echo DNA: major groove brown, minor groove blue select (30-55 and :4) backbone 100 center (atomno=287) #color purple select (:4 and (gln44 or gln33)) color mediumorchid wireframe 150 select (T23 or A24) wireframe 150 color mediumorchid select (HOH17 or HOH90) color mediumorchid spacefill zoom 200 set echo top echo The next button zooms in on the interaction in orchid color echo orchid