# Jason Kahn, University of Maryland #Use the line below if you haven't loaded the file yet. #load ideal_beta.pdb select backbone wireframe 150 select *.O and backbone spacefill 100 select *.H spacefill 100 select backbone hbonds on hbonds 20 color hbonds green # echo "This shows the beta sheet H-bonding pattern." echo "Press any key to continue" echo "" pause # # select one side of sheet to show alternating side chains select (2,4,6,8,11,13,15,17) and ((not backbone) or (*.CA)) wireframe 100 echo "This illustrates alternation of side chains on the sheet." echo "Press any key to continue" echo "" pause # # show beta sheet cartoon select backbone wireframe 50 cartoons color cartoons [100,100,100] echo "Shows the beta sheet cartoon representation." echo "Press any key to continue" echo "" pause # # spacefill other face and not backbone # Note the stacking of the loop residues. select (1,3,5,7,9,10,12,14,16,18) and ((not backbone) or (*.CA)) spacefill echo "Spacefill the other face and not the backbone." echo "The end"